IL_6HTQ_079

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AG*CCU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_079 not in the Motif Atlas

Geometric match to IL_7A0S_083

Geometric discrepancy: 0.1718

The information below is about IL_7A0S_083

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_15011.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

48

Unit IDs

6HTQ|1|A|A|2482
6HTQ|1|A|G|2483
*
6HTQ|1|A|C|2527
6HTQ|1|A|C|2528
6HTQ|1|A|U|2529

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3