IL_6HTQ_104

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUG*CAAC

Length

7 nucleotides

Bulged bases

6HTQ|1|a|A|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_104 not in the Motif Atlas

Geometric match to IL_5M0H_001

Geometric discrepancy: 0.2056

The information below is about IL_5M0H_001

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

6HTQ|1|a|G|46
6HTQ|1|a|U|47
6HTQ|1|a|G|48
*
6HTQ|1|a|C|403
6HTQ|1|a|A|404
6HTQ|1|a|A|405
6HTQ|1|a|C|406

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16