IL_6HTQ_119

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

6HTQ|1|a|G|396

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_119 not in the Motif Atlas

Geometric match to IL_4LFB_016

Geometric discrepancy: 0.1953

The information below is about IL_4LFB_016

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

6HTQ|1|a|U|383
6HTQ|1|a|G|384
*
6HTQ|1|a|U|395
6HTQ|1|a|G|396
6HTQ|1|a|A|397

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16