IL_6HTQ_192
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CAGC*GUGGG
- Length
- 9 nucleotides
- Bulged bases
- 6HTQ|1|A|G|2267
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_192 not in the Motif Atlas
- Geometric match to IL_3NPQ_006
- Geometric discrepancy: 0.2938
- The information below is about IL_3NPQ_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
6HTQ|1|A|C|2110
6HTQ|1|A|A|2111
6HTQ|1|A|G|2112
6HTQ|1|A|C|2113
*
6HTQ|1|A|G|2264
6HTQ|1|A|U|2265
6HTQ|1|A|G|2266
6HTQ|1|A|G|2267
6HTQ|1|A|G|2268
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain W
- 50S ribosomal protein L28
- Chain w
- Transfer RNA; tRNA
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