IL_6HTQ_204

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CG*CGCGGUAAUACGUAGG

Length

18 nucleotides

Bulged bases

6HTQ|1|a|G|539, 6HTQ|1|a|U|540, 6HTQ|1|a|A|541, 6HTQ|1|a|U|543

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HTQ|1|a|C|513
6HTQ|1|a|G|514
*
6HTQ|1|a|C|535
6HTQ|1|a|G|536
6HTQ|1|a|C|537
6HTQ|1|a|G|538
6HTQ|1|a|G|539
6HTQ|1|a|U|540
6HTQ|1|a|A|541
6HTQ|1|a|A|542
6HTQ|1|a|U|543
6HTQ|1|a|A|544
6HTQ|1|a|C|545
6HTQ|1|a|G|546
6HTQ|1|a|U|547
6HTQ|1|a|A|548
6HTQ|1|a|G|549
6HTQ|1|a|G|550

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain d

30S ribosomal protein S4

Chain l

30S ribosomal protein S12

Chain u

Transfer RNA; tRNA