IL_6I7O_115

3D structure

PDB id

6I7O (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

GGCCC*GGGUC

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7O|1|2b|G|487
6I7O|1|2b|G|488
6I7O|1|2b|C|489
6I7O|1|2b|C|490
6I7O|1|2b|C|491
*
6I7O|1|2b|G|496
6I7O|1|2b|G|497
6I7O|1|2b|G|498
6I7O|1|2b|U|499
6I7O|1|2b|C|500

Current chains

Chain 2b

18S ribosomal RNA

Nearby chains