IL_6I7O_156
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CUAC*GAG
- Length
- 7 nucleotides
- Bulged bases
- 6I7O|1|2b|U|1340
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6I7O_156 not in the Motif Atlas
- Geometric match to IL_4V88_455
- Geometric discrepancy: 0.2226
- The information below is about IL_4V88_455
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6I7O|1|2b|C|1339
6I7O|1|2b|U|1340
6I7O|1|2b|A|1341
6I7O|1|2b|C|1342
*
6I7O|1|2b|G|1383
6I7O|1|2b|A|1384
6I7O|1|2b|G|1385
Current chains
- Chain 2b
- 18S ribosomal RNA
Nearby chains
- Chain Fb
- 40S ribosomal protein S16-A
- Chain Gb
- 40S ribosomal protein S17-A
- Chain Jb
- 40S ribosomal protein S20
- Chain Ob
- Guanine nucleotide-binding protein subunit beta-like protein
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