IL_6I7O_330

3D structure

PDB id

6I7O (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

UGG*CUUUGUA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7O|1|YQ|U|169
6I7O|1|YQ|G|170
6I7O|1|YQ|G|171
*
6I7O|1|YQ|C|247
6I7O|1|YQ|U|248
6I7O|1|YQ|U|249
6I7O|1|YQ|U|250
6I7O|1|YQ|G|251
6I7O|1|YQ|U|252
6I7O|1|YQ|A|253

Current chains

Chain YQ

25S ribosomal RNA

Nearby chains

Chain XA

60S ribosomal protein L8-A

Chain XJ

60S ribosomal protein L13-A

Chain YP

60S ribosomal protein L35-A