IL_6I7O_368
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- UUU*AGA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6I7O_368 not in the Motif Atlas
- Homologous match to IL_8C3A_050
- Geometric discrepancy: 0.0692
- The information below is about IL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
6I7O|1|YQ|U|1123
6I7O|1|YQ|U|1124
6I7O|1|YQ|U|1125
*
6I7O|1|YQ|A|1133
6I7O|1|YQ|G|1134
6I7O|1|YQ|A|1135
Current chains
- Chain YQ
- 25S ribosomal RNA
Nearby chains
- Chain XV
- 60S ribosomal protein L29
- Chain YD
- 60S ribosomal protein L10
- Chain YJ
- 60S ribosomal protein L21-A
- Chain YR
- 5S ribosomal RNA; 5S rRNA
Coloring options: