IL_6I7O_425

3D structure

PDB id

6I7O (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

GUGG*CUUUUU

Length

10 nucleotides

Bulged bases

6I7O|1|YQ|U|2860

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7O|1|YQ|G|2828
6I7O|1|YQ|U|2829
6I7O|1|YQ|G|2830
6I7O|1|YQ|G|2831
*
6I7O|1|YQ|C|2857
6I7O|1|YQ|U|2858
6I7O|1|YQ|U|2859
6I7O|1|YQ|U|2860
6I7O|1|YQ|U|2861
6I7O|1|YQ|U|2862

Current chains

Chain YQ

25S ribosomal RNA

Nearby chains

Chain YA

60S ribosomal protein L3

Chain YD

60S ribosomal protein L10

Chain nb

Transfer RNA; tRNA