IL_6I7O_496
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- AC*GAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6I7O_496 not in the Motif Atlas
- Homologous match to IL_8CRE_428
- Geometric discrepancy: 0.1155
- The information below is about IL_8CRE_428
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73108.2
- Basepair signature
- cWW-cWS-cSH-cWW
- Number of instances in this motif group
- 23
Unit IDs
6I7O|1|2|A|746
6I7O|1|2|C|747
*
6I7O|1|2|G|802
6I7O|1|2|A|803
6I7O|1|2|A|804
6I7O|1|2|U|805
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain U
- 40S ribosomal protein S7-A
- Chain X
- 40S ribosomal protein S11-A
- Chain b
- 40S ribosomal protein S22-A
- Chain c
- 40S ribosomal protein S23-A
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