IL_6I7V_011

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

6I7V|1|AA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_011 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.0858

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

6I7V|1|AA|G|147
6I7V|1|AA|G|148
6I7V|1|AA|A|149
6I7V|1|AA|U|150
6I7V|1|AA|A|151
6I7V|1|AA|A|152
6I7V|1|AA|C|153
*
6I7V|1|AA|G|168
6I7V|1|AA|C|169
6I7V|1|AA|U|170
6I7V|1|AA|A|171
6I7V|1|AA|A|172
6I7V|1|AA|U|173
6I7V|1|AA|A|174
6I7V|1|AA|C|175

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AT

30S ribosomal protein S20