IL_6I7V_036

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAGUACG*UAAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_036 not in the Motif Atlas

Homologous match to IL_5J7L_038

Geometric discrepancy: 0.0603

The information below is about IL_5J7L_038

Detailed Annotation

8x6 Sarcin-Ricin with inserted Y; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_41756.4

Basepair signature

cWW-tSH-tHH-cSH-tWH-tHS-cWW-L

Number of instances in this motif group

4

Unit IDs

6I7V|1|AA|G|887
6I7V|1|AA|G|888
6I7V|1|AA|A|889
6I7V|1|AA|G|890
6I7V|1|AA|U|891
6I7V|1|AA|A|892
6I7V|1|AA|C|893
6I7V|1|AA|G|894
*
6I7V|1|AA|U|905
6I7V|1|AA|A|906
6I7V|1|AA|A|907
6I7V|1|AA|A|908
6I7V|1|AA|A|909
6I7V|1|AA|C|910

Current chains

Chain AA

16S ribosmal RNA

Nearby chains

Chain AL

30S ribosomal protein S12