IL_6I7V_095

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UAGAG*UGGA

Length

9 nucleotides

Bulged bases

6I7V|1|BA|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_095 not in the Motif Atlas

Homologous match to IL_4LFB_029

Geometric discrepancy: 0.1626

The information below is about IL_4LFB_029

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

6I7V|1|BA|U|662
6I7V|1|BA|A|663
6I7V|1|BA|G|664
6I7V|1|BA|A|665
6I7V|1|BA|G|666
*
6I7V|1|BA|U|740
6I7V|1|BA|G|741
6I7V|1|BA|G|742
6I7V|1|BA|A|743

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BF

30S ribosomal protein S6

Chain BO

30S ribosomal protein S15

Chain BR

30S ribosomal protein S18