IL_6I7V_098

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAAAC*GGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_098 not in the Motif Atlas

Homologous match to IL_4LFB_033

Geometric discrepancy: 0.1085

The information below is about IL_4LFB_033

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_05821.1

Basepair signature

cWW-tSH-tHW-tHS-cWW

Number of instances in this motif group

17

Unit IDs

6I7V|1|BA|C|779
6I7V|1|BA|A|780
6I7V|1|BA|A|781
6I7V|1|BA|A|782
6I7V|1|BA|C|783
*
6I7V|1|BA|G|799
6I7V|1|BA|G|800
6I7V|1|BA|U|801
6I7V|1|BA|A|802
6I7V|1|BA|G|803

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BK

30S ribosomal protein S11

Chain BU

30S ribosomal protein S21

Chain CA

Large subunit ribosomal RNA; LSU rRNA