IL_6I7V_107

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGCAU*AUGG

Length

10 nucleotides

Bulged bases

6I7V|1|BA|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_107 not in the Motif Atlas

Geometric match to IL_4V88_473

Geometric discrepancy: 0.3224

The information below is about IL_4V88_473

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

6I7V|1|BA|C|1051
6I7V|1|BA|U|1052
6I7V|1|BA|G|1053
6I7V|1|BA|C|1054
6I7V|1|BA|A|1055
6I7V|1|BA|U|1056
*
6I7V|1|BA|A|1204
6I7V|1|BA|U|1205
6I7V|1|BA|G|1206
6I7V|1|BA|G|1207

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BJ

30S ribosomal protein S10

Chain BN

30S ribosomal protein S14