IL_6I7V_163

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUUC*GAAGUG

Length

11 nucleotides

Bulged bases

6I7V|1|CA|G|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_163 not in the Motif Atlas

Geometric match to IL_7VYX_008

Geometric discrepancy: 0.3368

The information below is about IL_7VYX_008

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_71154.1

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

10

Unit IDs

6I7V|1|CA|C|1196
6I7V|1|CA|G|1197
6I7V|1|CA|U|1198
6I7V|1|CA|U|1199
6I7V|1|CA|C|1200
*
6I7V|1|CA|G|1245
6I7V|1|CA|A|1246
6I7V|1|CA|A|1247
6I7V|1|CA|G|1248
6I7V|1|CA|U|1249
6I7V|1|CA|G|1250

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CE

50S ribosomal protein L4

Chain CM

50S ribosomal protein L15

Chain CR

50S ribosomal protein L20