IL_6I7V_193

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAAAUUCCUUG*CCUG

Length

16 nucleotides

Bulged bases

6I7V|1|CA|A|1938, 6I7V|1|CA|U|1944

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_193 not in the Motif Atlas

Homologous match to IL_4WF9_077

Geometric discrepancy: 0.1488

The information below is about IL_4WF9_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84014.1

Basepair signature

cWW-L-R-cHW-cWW-L-L-tSW-L

Number of instances in this motif group

8

Unit IDs

6I7V|1|CA|C|1934
6I7V|1|CA|G|1935
6I7V|1|CA|A|1936
6I7V|1|CA|A|1937
6I7V|1|CA|A|1938
6I7V|1|CA|U|1939
6I7V|1|CA|U|1940
6I7V|1|CA|C|1941
6I7V|1|CA|C|1942
6I7V|1|CA|U|1943
6I7V|1|CA|U|1944
6I7V|1|CA|G|1945
*
6I7V|1|CA|C|1961
6I7V|1|CA|C|1962
6I7V|1|CA|U|1963
6I7V|1|CA|G|1964

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA

Chain CC

50S ribosomal protein L2