IL_6I7V_219

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUAGUAC*GGACCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_219 not in the Motif Atlas

Homologous match to IL_5J7L_346

Geometric discrepancy: 0.1161

The information below is about IL_5J7L_346

Detailed Annotation

Sarcin-Ricin target in LSU H95; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_16458.4

Basepair signature

cWW-L-R-L-R-cSH-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

6I7V|1|CA|C|2652
6I7V|1|CA|U|2653
6I7V|1|CA|A|2654
6I7V|1|CA|G|2655
6I7V|1|CA|U|2656
6I7V|1|CA|A|2657
6I7V|1|CA|C|2658
*
6I7V|1|CA|G|2663
6I7V|1|CA|G|2664
6I7V|1|CA|A|2665
6I7V|1|CA|C|2666
6I7V|1|CA|C|2667
6I7V|1|CA|G|2668

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CG

50S ribosomal protein L6