IL_6I7V_223

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_223 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.1193

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6I7V|1|CA|G|2737
6I7V|1|CA|A|2738
6I7V|1|CA|U|2739
6I7V|1|CA|A|2740
6I7V|1|CA|A|2741
6I7V|1|CA|G|2742
*
6I7V|1|CA|C|2762
6I7V|1|CA|G|2763
6I7V|1|CA|A|2764
6I7V|1|CA|A|2765
6I7V|1|CA|A|2766
6I7V|1|CA|C|2767

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C5

50S ribosomal protein L36 2

Chain CG

50S ribosomal protein L6

Chain CK

50S ribosomal protein L13