IL_6I7V_272

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

6I7V|1|DA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_272 not in the Motif Atlas

Homologous match to IL_5J7L_284

Geometric discrepancy: 0.0613

The information below is about IL_5J7L_284

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

6I7V|1|DA|C|1043
6I7V|1|DA|C|1044
6I7V|1|DA|C|1045
6I7V|1|DA|A|1046
6I7V|1|DA|G|1047
6I7V|1|DA|A|1048
6I7V|1|DA|C|1049
6I7V|1|DA|A|1050
6I7V|1|DA|G|1051
*
6I7V|1|DA|U|1108
6I7V|1|DA|C|1109
6I7V|1|DA|G|1110
6I7V|1|DA|A|1111
6I7V|1|DA|G|1112

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DG

50S ribosomal protein L6