IL_6I7V_276

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

6I7V|1|DA|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_276 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.0687

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

6I7V|1|DA|C|1208
6I7V|1|DA|U|1209
6I7V|1|DA|G|1210
6I7V|1|DA|C|1211
6I7V|1|DA|G|1212
6I7V|1|DA|A|1213
6I7V|1|DA|A|1214
6I7V|1|DA|G|1215
*
6I7V|1|DA|U|1234
6I7V|1|DA|G|1235
6I7V|1|DA|G|1236
6I7V|1|DA|A|1237
6I7V|1|DA|G|1238

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DR

50S ribosomal protein L20