IL_6I7V_285

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

6I7V|1|DA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_285 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.0718

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

6I7V|1|DA|C|1437
6I7V|1|DA|U|1438
6I7V|1|DA|A|1439
6I7V|1|DA|U|1440
*
6I7V|1|DA|A|1551
6I7V|1|DA|A|1552
6I7V|1|DA|A|1553
6I7V|1|DA|U|1554
6I7V|1|DA|G|1555

Current chains

Chain DA

23S ribosomal RNA

Nearby chains