IL_6I7V_363

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGGGC*GCCUGA

Length

11 nucleotides

Bulged bases

6I7V|1|BA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_363 not in the Motif Atlas

Geometric match to IL_7VYX_008

Geometric discrepancy: 0.3105

The information below is about IL_7VYX_008

Detailed Annotation

Partly complementary

Broad Annotation

Partly complementary

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

6I7V|1|BA|U|375
6I7V|1|BA|G|376
6I7V|1|BA|G|377
6I7V|1|BA|G|378
6I7V|1|BA|C|379
*
6I7V|1|BA|G|384
6I7V|1|BA|C|385
6I7V|1|BA|C|386
6I7V|1|BA|U|387
6I7V|1|BA|G|388
6I7V|1|BA|A|389

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BP

30S ribosomal protein S16