IL_6I7V_376

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGCAAG*CAACCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_376 not in the Motif Atlas

Geometric match to IL_1L9A_008

Geometric discrepancy: 0.3971

The information below is about IL_1L9A_008

Detailed Annotation

tSH-tHW-tHS-cWW

Broad Annotation

No text annotation

Motif group

IL_71294.3

Basepair signature

cWW-L-R-L-R-L-R-L-R-cWW

Number of instances in this motif group

2

Unit IDs

6I7V|1|CA|G|874
6I7V|1|CA|G|875
6I7V|1|CA|C|876
6I7V|1|CA|A|877
6I7V|1|CA|A|878
6I7V|1|CA|G|879
*
6I7V|1|CA|C|898
6I7V|1|CA|A|899
6I7V|1|CA|A|900
6I7V|1|CA|C|901
6I7V|1|CA|C|902
6I7V|1|CA|C|903

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CN

50S ribosomal protein L16