IL_6I7V_380

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_380 not in the Motif Atlas

Homologous match to IL_5J7L_386

Geometric discrepancy: 0.0955

The information below is about IL_5J7L_386

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

6I7V|1|CA|G|1666
6I7V|1|CA|G|1667
6I7V|1|CA|A|1668
6I7V|1|CA|A|1669
6I7V|1|CA|C|1670
6I7V|1|CA|U|1671
6I7V|1|CA|A|1672
6I7V|1|CA|G|1673
6I7V|1|CA|G|1674
*
6I7V|1|CA|C|1990
6I7V|1|CA|U|1991
6I7V|1|CA|G|1992
6I7V|1|CA|U|1993
6I7V|1|CA|C|1994

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CD

50S ribosomal protein L3

Chain CL

50S ribosomal protein L14