IL_6I7V_411

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGG*CACA

Length

7 nucleotides

Bulged bases

6I7V|1|BA|A|1227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_411 not in the Motif Atlas

Geometric match to IL_8CRE_464

Geometric discrepancy: 0.3778

The information below is about IL_8CRE_464

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

6I7V|1|BA|U|952
6I7V|1|BA|G|953
6I7V|1|BA|G|954
*
6I7V|1|BA|C|1226
6I7V|1|BA|A|1227
6I7V|1|BA|C|1228
6I7V|1|BA|A|1229

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain BM

30S ribosomal protein S13

Chain BS

30S ribosomal protein S19