IL_6I7V_420

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_420 not in the Motif Atlas

Homologous match to IL_4WF9_062

Geometric discrepancy: 0.1624

The information below is about IL_4WF9_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.5

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

6I7V|1|CA|G|1651
6I7V|1|CA|A|1652
6I7V|1|CA|G|1653
6I7V|1|CA|A|1654
6I7V|1|CA|A|1655
6I7V|1|CA|C|1656
*
6I7V|1|CA|G|2004
6I7V|1|CA|A|2005
6I7V|1|CA|C|2006

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CD

50S ribosomal protein L3

Chain CO

50S ribosomal protein L17