IL_6I7V_422

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_422 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.1223

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

6I7V|1|CA|U|1851
6I7V|1|CA|U|1852
6I7V|1|CA|A|1853
6I7V|1|CA|A|1854
6I7V|1|CA|U|1855
6I7V|1|CA|U|1856
6I7V|1|CA|G|1857
6I7V|1|CA|A|1858
6I7V|1|CA|U|1859
6I7V|1|CA|G|1860
*
6I7V|1|CA|U|1882
6I7V|1|CA|U|1883
6I7V|1|CA|G|1884
6I7V|1|CA|A|1885
6I7V|1|CA|U|1886
6I7V|1|CA|C|1887
6I7V|1|CA|G|1888
6I7V|1|CA|A|1889
6I7V|1|CA|A|1890
6I7V|1|CA|G|1891

Current chains

Chain CA

23S ribsomal RNA

Nearby chains