IL_6I7V_423

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCCU*AUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_423 not in the Motif Atlas

Homologous match to IL_5J7L_327

Geometric discrepancy: 0.3175

The information below is about IL_5J7L_327

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_43644.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

2

Unit IDs

6I7V|1|CA|G|2102
6I7V|1|CA|C|2103
6I7V|1|CA|C|2104
6I7V|1|CA|U|2105
*
6I7V|1|CA|A|2184
6I7V|1|CA|U|2185
6I7V|1|CA|G|2186
6I7V|1|CA|U|2187

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CH

50S ribosomal protein L9