IL_6IP5_031
3D structure
- PDB id
- 6IP5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AAGG*CAGCAGCACU
- Length
- 14 nucleotides
- Bulged bases
- 6IP5|1|1A|A|932, 6IP5|1|1A|C|934, 6IP5|1|1A|A|935, 6IP5|1|1A|C|936
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6IP5|1|1A|A|732
6IP5|1|1A|A|733
6IP5|1|1A|G|734
6IP5|1|1A|G|735
*
6IP5|1|1A|C|928
6IP5|1|1A|A|929
6IP5|1|1A|G|930
6IP5|1|1A|C|931
6IP5|1|1A|A|932
6IP5|1|1A|G|933
6IP5|1|1A|C|934
6IP5|1|1A|A|935
6IP5|1|1A|C|936
6IP5|1|1A|U|937
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1F
- 60S ribosomal protein L4
- Chain 2G
- 60S ribosomal protein L14
- Chain 2M
- 60S ribosomal protein L18a
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