IL_6IP5_107
3D structure
- PDB id
- 6IP5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUCAAAGU*AAUGAAGC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6IP5|1|1A|G|3714
6IP5|1|1A|U|3715
6IP5|1|1A|C|3716
6IP5|1|1A|A|3717
6IP5|1|1A|A|3718
6IP5|1|1A|A|3719
6IP5|1|1A|G|3720
6IP5|1|1A|U|3721
*
6IP5|1|1A|A|3732
6IP5|1|1A|A|3733
6IP5|1|1A|U|3734
6IP5|1|1A|G|3735
6IP5|1|1A|A|3736
6IP5|1|1A|A|3737
6IP5|1|1A|G|3738
6IP5|1|1A|C|3739
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1D
- 60S ribosomal protein L8
- Chain 2c
- 60S ribosomal protein L36
- Chain zu
- Transfer RNA; tRNA
Coloring options: