IL_6IP5_197

3D structure

PDB id

6IP5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGGUUC*GGAACUG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6IP5|1|2m|C|879
6IP5|1|2m|G|880
6IP5|1|2m|G|881
6IP5|1|2m|U|882
6IP5|1|2m|U|883
6IP5|1|2m|C|884
*
6IP5|1|2m|G|901
6IP5|1|2m|G|902
6IP5|1|2m|A|903
6IP5|1|2m|A|904
6IP5|1|2m|C|905
6IP5|1|2m|U|906
6IP5|1|2m|G|907

Current chains

Chain 2m

18S ribosomal RNA

Nearby chains

Chain 2L

60S ribosomal protein L19

Chain 2v

40S ribosomal protein S11