IL_6IP6_136
3D structure
- PDB id
- 6IP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UGGUGUAUG*CGAAGCUA
- Length
- 17 nucleotides
- Bulged bases
- 6IP6|1|1A|U|4634, 6IP6|1|1A|U|4636
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6IP6|1|1A|U|4629
6IP6|1|1A|G|4630
6IP6|1|1A|G|4631
6IP6|1|1A|U|4632
6IP6|1|1A|G|4633
6IP6|1|1A|U|4634
6IP6|1|1A|A|4635
6IP6|1|1A|U|4636
6IP6|1|1A|G|4637
*
6IP6|1|1A|C|4662
6IP6|1|1A|G|4663
6IP6|1|1A|A|4664
6IP6|1|1A|A|4665
6IP6|1|1A|G|4666
6IP6|1|1A|C|4667
6IP6|1|1A|U|4668
6IP6|1|1A|A|4669
Current chains
- Chain 1A
- 28S ribosomal RNA
Nearby chains
- Chain 1E
- 60S ribosomal protein L3
- Chain 2P
- 60S ribosomal protein L23
- Chain 2Q
- 60S ribosomal protein L24
- Chain 2X
- 60S ribosomal protein L31
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