IL_6IP6_264
3D structure
- PDB id
- 6IP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 6IP6|1|2m|U|1543
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6IP6|1|2m|G|1541
6IP6|1|2m|C|1542
6IP6|1|2m|U|1543
6IP6|1|2m|C|1544
6IP6|1|2m|A|1545
6IP6|1|2m|G|1546
6IP6|1|2m|C|1547
6IP6|1|2m|G|1548
6IP6|1|2m|U|1549
6IP6|1|2m|G|1550
*
6IP6|1|2m|C|1582
6IP6|1|2m|C|1583
6IP6|1|2m|G|1584
6IP6|1|2m|U|1585
6IP6|1|2m|U|1586
6IP6|1|2m|G|1587
6IP6|1|2m|A|1588
6IP6|1|2m|A|1589
6IP6|1|2m|C|1590
6IP6|1|2m|C|1591
6IP6|1|2m|C|1592
Current chains
- Chain 2m
- 18S ribosomal RNA
Nearby chains
- Chain 20
- 40S ribosomal protein S19
- Chain 21
- 40S ribosomal protein S20
- Chain 2p
- 40S ribosomal protein S3
- Chain 2r
- 40S ribosomal protein S5
- Chain 2x
- 40S ribosomal protein S16
- Chain 3E
- 40S ribosomal protein S29
- Chain 3O
- 40S ribosomal protein S25
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