IL_6J6G_015
3D structure
- PDB id
- 6J6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUCUC*GUUCU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6J6G_015 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.2863
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
6J6G|1|B|G|253
6J6G|1|B|U|254
6J6G|1|B|C|255
6J6G|1|B|U|256
6J6G|1|B|C|257
*
6J6G|1|L|G|43
6J6G|1|L|U|44
6J6G|1|L|U|45
6J6G|1|L|C|46
6J6G|1|L|U|47
Current chains
- Chain B
- ACT1 pre-mRNA
- Chain L
- U2 snRNA
Nearby chains
- Chain A
- Pre-mRNA-splicing factor 8
- Chain H
- Pre-mRNA-splicing factor ISY1
Coloring options: