IL_6KE6_022
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUG*CUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6KE6_022 not in the Motif Atlas
- Geometric match to IL_280D_001
- Geometric discrepancy: 0.1035
- The information below is about IL_280D_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_77658.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
6KE6|1|5A|G|346
6KE6|1|5A|U|347
6KE6|1|5A|U|348
6KE6|1|5A|G|349
*
6KE6|1|5A|C|375
6KE6|1|5A|U|376
6KE6|1|5A|U|377
6KE6|1|5A|C|378
Current chains
- Chain 5A
- 5' ETS
Nearby chains
- Chain 5C
- U3 small nucleolar RNA-associated protein 7
- Chain RC
- KRR1 small subunit processome component
- Chain RQ
- U3 small nucleolar RNA-associated protein 14
- Chain RV
- Protein FAF1
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