IL_6LKQ_024

3D structure

PDB id

6LKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGCUAACU*AGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LKQ|1|s|C|504
6LKQ|1|s|G|505
6LKQ|1|s|G|506
6LKQ|1|s|C|507
6LKQ|1|s|U|508
6LKQ|1|s|A|509
6LKQ|1|s|A|510
6LKQ|1|s|C|511
6LKQ|1|s|U|512
*
6LKQ|1|s|A|539
6LKQ|1|s|G|540
6LKQ|1|s|G|541

Current chains

Chain s

16S ribosomal RNA

Nearby chains

Chain C

30S ribosomal protein S4

Chain K

30S ribosomal protein S12