IL_6LKQ_029

3D structure

PDB id

6LKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AGU*AUACU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LKQ|1|s|A|596
6LKQ|1|s|G|597
6LKQ|1|s|U|598
*
6LKQ|1|s|A|640
6LKQ|1|s|U|641
6LKQ|1|s|A|642
6LKQ|1|s|C|643
6LKQ|1|s|U|644

Current chains

Chain s

16S ribosomal RNA

Nearby chains

Chain G

30S ribosomal protein S8

Chain P

30S ribosomal protein S17