IL_6LKQ_041
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUUUAAUUCGAUGCAACGCGAAGAACCUUAC*GGCUACAC
- Length
- 40 nucleotides
- Bulged bases
- 6LKQ|1|s|G|971, 6LKQ|1|s|A|975, 6LKQ|1|s|G|976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LKQ|1|s|G|953
6LKQ|1|s|G|954
6LKQ|1|s|U|955
6LKQ|1|s|U|956
6LKQ|1|s|U|957
6LKQ|1|s|A|958
6LKQ|1|s|A|959
6LKQ|1|s|U|960
6LKQ|1|s|U|961
6LKQ|1|s|C|962
6LKQ|1|s|G|963
6LKQ|1|s|A|964
6LKQ|1|s|U|965
6LKQ|1|s|G|966
6LKQ|1|s|C|967
6LKQ|1|s|A|968
6LKQ|1|s|A|969
6LKQ|1|s|C|970
6LKQ|1|s|G|971
6LKQ|1|s|C|972
6LKQ|1|s|G|973
6LKQ|1|s|A|974
6LKQ|1|s|A|975
6LKQ|1|s|G|976
6LKQ|1|s|A|977
6LKQ|1|s|A|978
6LKQ|1|s|C|979
6LKQ|1|s|C|980
6LKQ|1|s|U|981
6LKQ|1|s|U|982
6LKQ|1|s|A|983
6LKQ|1|s|C|984
*
6LKQ|1|s|G|1221
6LKQ|1|s|G|1222
6LKQ|1|s|C|1223
6LKQ|1|s|U|1224
6LKQ|1|s|A|1225
6LKQ|1|s|C|1226
6LKQ|1|s|A|1227
6LKQ|1|s|C|1228
Current chains
- Chain s
- 16S ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S9
- Chain I
- 30S ribosomal protein S10
- Chain L
- 30S ribosomal protein S13
- Chain M
- 30S ribosomal protein S14
- Chain R
- 30S ribosomal protein S19
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