IL_6LKQ_096
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUC*GC
- Length
- 5 nucleotides
- Bulged bases
- 6LKQ|1|t|U|1012
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LKQ_096 not in the Motif Atlas
- Homologous match to IL_5J7L_279
- Geometric discrepancy: 0.1257
- The information below is about IL_5J7L_279
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
6LKQ|1|t|G|1011
6LKQ|1|t|U|1012
6LKQ|1|t|C|1013
*
6LKQ|1|t|G|1149
6LKQ|1|t|C|1150
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L13
- Chain 8
- 50S ribosomal protein L20
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