IL_6LKQ_173
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- 6LKQ|1|s|A|412
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LKQ_173 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.2725
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6LKQ|1|s|U|409
6LKQ|1|s|G|410
6LKQ|1|s|A|411
6LKQ|1|s|A|412
6LKQ|1|s|G|413
6LKQ|1|s|A|414
6LKQ|1|s|A|415
6LKQ|1|s|G|416
*
6LKQ|1|s|U|427
6LKQ|1|s|G|428
6LKQ|1|s|U|429
6LKQ|1|s|A|430
6LKQ|1|s|A|431
6LKQ|1|s|A|432
6LKQ|1|s|G|433
Current chains
- Chain s
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
Coloring options: