IL_6LKQ_179

3D structure

PDB id

6LKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGACCU*AGCAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LKQ|1|s|C|1259
6LKQ|1|s|G|1260
6LKQ|1|s|A|1261
6LKQ|1|s|C|1262
6LKQ|1|s|C|1263
6LKQ|1|s|U|1264
*
6LKQ|1|s|A|1271
6LKQ|1|s|G|1272
6LKQ|1|s|C|1273
6LKQ|1|s|A|1274
6LKQ|1|s|A|1275
6LKQ|1|s|G|1276

Current chains

Chain s

16S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S14

Chain R

30S ribosomal protein S19