IL_6LKQ_182

3D structure

PDB id

6LKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCAAGGGGG*CUUACCAACC

Length

19 nucleotides

Bulged bases

6LKQ|1|t|U|895, 6LKQ|1|t|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LKQ|1|t|G|875
6LKQ|1|t|C|876
6LKQ|1|t|A|877
6LKQ|1|t|A|878
6LKQ|1|t|G|879
6LKQ|1|t|G|880
6LKQ|1|t|G|881
6LKQ|1|t|G|882
6LKQ|1|t|G|883
*
6LKQ|1|t|C|893
6LKQ|1|t|U|894
6LKQ|1|t|U|895
6LKQ|1|t|A|896
6LKQ|1|t|C|897
6LKQ|1|t|C|898
6LKQ|1|t|A|899
6LKQ|1|t|A|900
6LKQ|1|t|C|901
6LKQ|1|t|C|902

Current chains

Chain t

23S ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L16