IL_6LKQ_185
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AGGAUGUUG*CAUCAUUUAAAGAAAGCGUAAUAGCUCACU
- Length
- 39 nucleotides
- Bulged bases
- 6LKQ|1|t|U|1061, 6LKQ|1|t|U|1094, 6LKQ|1|t|A|1095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LKQ|1|t|A|1054
6LKQ|1|t|G|1055
6LKQ|1|t|G|1056
6LKQ|1|t|A|1057
6LKQ|1|t|U|1058
6LKQ|1|t|G|1059
6LKQ|1|t|U|1060
6LKQ|1|t|U|1061
6LKQ|1|t|G|1062
*
6LKQ|1|t|C|1076
6LKQ|1|t|A|1077
6LKQ|1|t|U|1078
6LKQ|1|t|C|1079
6LKQ|1|t|A|1080
6LKQ|1|t|U|1081
6LKQ|1|t|U|1082
6LKQ|1|t|U|1083
6LKQ|1|t|A|1084
6LKQ|1|t|A|1085
6LKQ|1|t|A|1086
6LKQ|1|t|G|1087
6LKQ|1|t|A|1088
6LKQ|1|t|A|1089
6LKQ|1|t|A|1090
6LKQ|1|t|G|1091
6LKQ|1|t|C|1092
6LKQ|1|t|G|1093
6LKQ|1|t|U|1094
6LKQ|1|t|A|1095
6LKQ|1|t|A|1096
6LKQ|1|t|U|1097
6LKQ|1|t|A|1098
6LKQ|1|t|G|1099
6LKQ|1|t|C|1100
6LKQ|1|t|U|1101
6LKQ|1|t|C|1102
6LKQ|1|t|A|1103
6LKQ|1|t|C|1104
6LKQ|1|t|U|1105
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain Y
- 50S ribosomal protein L6
- Chain Z
- 50S ribosomal protein L11
- Chain m
- 50S ribosomal protein L36
- Chain n
- 50S ribosomal protein L10
Coloring options: