IL_6LQP_077

3D structure

PDB id

6LQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

6LQP|1|SA|U|1269

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQP|1|SA|G|1268
6LQP|1|SA|U|1269
6LQP|1|SA|G|1270
*
6LQP|1|SA|C|1440
6LQP|1|SA|C|1441

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain RG

Ribosomal RNA small subunit methyltransferase NEP1

Chain RS

Essential nuclear protein 1