IL_6LQR_073

3D structure

PDB id

6LQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State C)

Experimental method

ELECTRON MICROSCOPY

Resolution

8.6 Å

Loop

Sequence

CUCAGGAUCUG*CGGAGAAUUUG

Length

22 nucleotides

Bulged bases

6LQR|1|SA|A|1681

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQR|1|SA|C|1675
6LQR|1|SA|U|1676
6LQR|1|SA|C|1677
6LQR|1|SA|A|1678
6LQR|1|SA|G|1679
6LQR|1|SA|G|1680
6LQR|1|SA|A|1681
6LQR|1|SA|U|1682
6LQR|1|SA|C|1683
6LQR|1|SA|U|1684
6LQR|1|SA|G|1685
*
6LQR|1|SA|C|1716
6LQR|1|SA|G|1717
6LQR|1|SA|G|1718
6LQR|1|SA|A|1719
6LQR|1|SA|G|1720
6LQR|1|SA|A|1721
6LQR|1|SA|A|1722
6LQR|1|SA|U|1723
6LQR|1|SA|U|1724
6LQR|1|SA|U|1725
6LQR|1|SA|G|1726

Current chains

Chain SA

18S pre-rRNA

Nearby chains