IL_6LQT_006
3D structure
- PDB id
- 6LQT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.9 Å
Loop
- Sequence
- GUGAG*CGAUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 6LQT|1|3A|U|255
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LQT|1|3A|G|111
6LQT|1|3A|U|112
6LQT|1|3A|G|113
6LQT|1|3A|A|114
6LQT|1|3A|G|115
*
6LQT|1|3A|C|252
6LQT|1|3A|G|253
6LQT|1|3A|A|254
6LQT|1|3A|U|255
6LQT|1|3A|G|256
6LQT|1|3A|A|257
6LQT|1|3A|U|258
6LQT|1|3A|C|259
Current chains
- Chain 3A
- U3 snoRNA
Nearby chains
- Chain 3D
- Nucleolar protein 56
- Chain 3F
- Ribosomal RNA-processing protein 9
- Chain 3H
- 13 kDa ribonucleoprotein-associated protein
- Chain 5H
- Something about silencing protein 10
- Chain 5J
- rRNA-processing protein FCF2
Coloring options: