IL_6LQU_025
3D structure
- PDB id
- 6LQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCGAUA*UGGAACC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LQU|1|5A|G|402
6LQU|1|5A|C|403
6LQU|1|5A|G|404
6LQU|1|5A|A|405
6LQU|1|5A|U|406
6LQU|1|5A|A|407
*
6LQU|1|5A|U|449
6LQU|1|5A|G|450
6LQU|1|5A|G|451
6LQU|1|5A|A|452
6LQU|1|5A|A|453
6LQU|1|5A|C|454
6LQU|1|5A|C|455
Current chains
- Chain 5A
- 5' ETS
Nearby chains
- Chain 5D
- U3 small nucleolar RNA-associated protein 11
- Chain 5F
- U3 small nucleolar ribonucleoprotein protein IMP3
- Chain 5J
- rRNA-processing protein FCF2
- Chain RJ
- Ribosome biogenesis protein BMS1
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