IL_6LQU_060

3D structure

PDB id

6LQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S small subunit preribosomes in transition states (State A1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAACUUA*UA

Length

10 nucleotides

Bulged bases

6LQU|1|SA|U|864

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQU|1|SA|U|633
6LQU|1|SA|G|634
6LQU|1|SA|A|635
6LQU|1|SA|A|636
6LQU|1|SA|C|637
6LQU|1|SA|U|638
6LQU|1|SA|U|864
6LQU|1|SA|A|865
*
6LQU|1|SA|U|965
6LQU|1|SA|A|966

Current chains

Chain SA

18S pre-rRNA

Nearby chains

Chain SO

40S ribosomal protein S13